BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022H02SP1|AL427960
(819 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1506 1601 0.0
>3x_Contig1506
Length = 7652
Score = 1601 bits (805), Expect = 0.0
Identities = 815/819 (99%), Gaps = 1/819 (0%)
Strand = Plus / Minus
Query: 1 cgattwggatgctatcagtaaagctttggaacaagctaagctttctgatagaccaacttt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3981 cgatttggatgctatcagtaaagctttggaacaagctaagctttctgatagaccaacttt 3922
Query: 61 gatcaagttgaccaccactatcggtttcggttctctgaatgctggttctcactccgttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3921 gatcaagttgaccaccactatcggtttcggttctctgaatgctggttctcactccgttca 3862
Query: 121 cggtgccccattgaaggctgatgatgtcaagcaattgaaggtcaaattcggtttcaaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3861 cggtgccccattgaaggctgatgatgtcaagcaattgaaggtcaaattcggtttcaaccc 3802
Query: 181 agaagaatccttcgttgttccacaagaagtttacgatctttacaacaaatccaccatcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3801 agaagaatccttcgttgttccacaagaagtttacgatctttacaacaaatccaccatcga 3742
Query: 241 accaggtatcgaagccaacaagcaatgggatgctttattggacgcttacgttggccagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3741 accaggtatcgaagccaacaagcaatgggatgctttattggacgcttacgttggccagtt 3682
Query: 301 cccagaattaggtgctgaagtcaagagaagattagcaggtgaattcccagaaggttggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3681 cccagaattaggtgctgaagtcaagagaagattagcaggtgaattcccagaaggttggga 3622
Query: 361 atccaagttgccaacttacaccccagaagactctgccgtcgcctccagaaagttgtctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3621 atccaagttgccaacttacaccccagaagactctgccgtcgcctccagaaagttgtctga 3562
Query: 421 watcgttttggataacgttttcgacactttgccagaattgttgggtggttccgctgattt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3561 aatcgttttggataacgttttcgacactttgccagaattgttgggtggttccgctgattt 3502
Query: 481 gaccccatccaacttgaccagatctaagggtgccgttgacttccaacctccaatcactgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3501 gaccccatccaacttgaccagatctaagggtgccgttgacttccaacctccaatcactgg 3442
Query: 541 tctaggtgattactccggtagatacatcagatacggtgttcgtgaacatggtatgggtgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3441 tctaggtgattactccggtagatacatcagatacggtgttcgtgaacatggtatgggtgc 3382
Query: 601 tatcatgaacggtatctctgcctttggtgctaactacagaccatacggtggtaccttctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3381 tatcatgaacggtatctctgcctttggtgctaactacagaccatacggtggtaccttctt 3322
Query: 661 gaacttcgtttcttacgcttccggtgcagtcagattgtccgctttgtccggacacccagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3321 gaacttcgtttcttacgcttccggtgcagtcagattgtccgctttgtccggacacccagt 3262
Query: 721 catctgggktcgccactcacgactctatcggtttgggtgaagatggtccaacccatcaac 780
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3261 catctggg-tcgccactcacgactctatcggtttgggtgaagatggtccaacccatcaac 3203
Query: 781 ctatcgaaaccttggctcacttyagagctattccaaacc 819
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 3202 ctatcgaaaccttggctcacttcagagctattccaaacc 3164
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4557
Number of Sequences: 1807
Number of extensions: 4557
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 819
length of database: 10,358,551
effective HSP length: 16
effective length of query: 803
effective length of database: 10,329,639
effective search space: 8294700117
effective search space used: 8294700117
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)